Software Development
Software for the simulation, analysis and visualization is developed in the Computational Systems Biochemistry group.
| Name | Description | Developers | Project Page |
|---|
| MetAnnoGen | The computer program MetAnnoGen facilitates the reconstruction of metabolic networks. It is an information system to collect and manage data from different databases and scientific literature in order to generate a metabolic network of biochemical reactions that can be subjected to further computational analyses. | Dr. Christoph Gille | Link |
| STRAP | Workbench for Protein alignments and protein structures | Dr. Christoph Gille | Link |
| STRAP - PubMed Management | Managment of pubmed abstracts and full texts: Javaws | Dr. Christoph Gille | Webstart |
| FASIMU | Flexible software for flux-balance computation series in large metabolic networks. | Dr. Andreas Hoppe | Link |
| FluxViz | Cytoscape Plugin for flux visualization | Matthias König | Link |
| cySBML | SBML support for Cytoscape | Matthias König | Link |
